| Gesamt | Hinrunde | Rückrunde | Gesamt | Heim | Auswärts |
| 34. Spieltag (06.05.2012) |
| Pl. | Logo | Mannschaft | Sp | S | U | N | Tore | Diff. | Pkt. |
| 1. |  |
Greuther Fürth | 34 | 20 | 10 | 4 | 73:27 | +46 | 70 |
| 2. |  |
Eintr. Frankfurt | 34 | 20 | 8 | 6 | 76:33 | +43 | 68 |
| 3. |  |
Fort. Düsseldorf | 34 | 16 | 14 | 4 | 64:35 | +29 | 62 |
| 4. |  |
FC St.Pauli | 34 | 18 | 8 | 8 | 59:34 | +25 | 62 |
| 5. |  |
SC Paderborn | 34 | 17 | 10 | 7 | 51:42 | +9 | 61 |
| 6. |  |
München 1860 | 34 | 17 | 6 | 11 | 62:46 | +16 | 57 |
| 7. |  |
Union Berlin | 34 | 14 | 6 | 14 | 55:58 | -3 | 48 |
| 8. |  |
E. Braunschweig | 34 | 10 | 15 | 9 | 37:35 | +2 | 45 |
| 9. |  |
Dyn. Dresden | 34 | 12 | 9 | 13 | 50:52 | -2 | 45 |
| 10. |  |
MSV Duisburg | 34 | 10 | 9 | 15 | 42:47 | -5 | 39 |
| 11. |  |
VfL Bochum | 34 | 10 | 7 | 17 | 41:55 | -14 | 37 |
| 12. |  |
FC Ingolstadt | 34 | 8 | 13 | 13 | 43:58 | -15 | 37 |
| 13. |  |
FSV Frankfurt | 34 | 7 | 14 | 13 | 43:59 | -16 | 35 |
| 14. |  |
Energie Cottbus | 34 | 8 | 11 | 15 | 30:49 | -19 | 35 |
| 15. |  |
Erzgebirge Aue | 34 | 8 | 11 | 15 | 31:55 | -24 | 35 |
| 16. |  |
Karlsruher SC | 34 | 9 | 6 | 19 | 34:60 | -26 | 33 |
| 17. |  |
Alem. Aachen | 34 | 6 | 13 | 15 | 30:47 | -17 | 31 |
| 18. |  |
Hansa Rostock | 34 | 5 | 12 | 17 | 34:63 | -29 | 27 |
